AccelrysCerius2, DMol3, InsightII | |
Demo License expired |
http://www.accelrys.com/ |
| ABAQUS | | Installed 6.4-3 |
http://www.abaqus.com/
|
| AMBER | | Installed Amber 8 |
http://amber.scripps.edu/ |
| ANSYS | | Installed 11.0
|
http://www.ansys.com/
|
ANSYS CFX | | Installed 10.0 11.0
|
http://www.ansys.com/cfx
|
| Compilers |
| IBM | Installed xlf 9.1, xlC 7.0 |
|
IBM xlf Web Site
IBM xlC Web Site |
| Intel | | Installed
7.1,8.0,8.1 9.1 |
Intel Linux Compilers Web Site |
Portland Group | | Installed
5.0,5.2,6.0 6.1,7.0 |
http://www.pgroup.com/ |
| |
| CPLEX | | Installed 9.0,10.1 |
http://www.ilog.com/products/cplex/ |
| CPMD | | In Progress |
http://www.cpmd.org/ |
| DL_POLY | | Installed 2.16, 3.06 |
http://www.cse.clrc.ac.uk/msi/software/DL_POLY/
|
| Gamess | | Installed 22_Feb_06 |
http://www.msg.ameslab.gov/GAMESS/
|
| Gaussian 03 | not available | not available |
Options for using Gaussian |
| LS-Dyna | | |
http://www.lstc.com/ being considered |
| Matlab | | Installed |
|
| bcMPI | | Installed |
Allows MPI calls in Matlab scripts
www.bluecollarcomputing.org/applications/bcMPI/index.shtml
|
| Math libraries | ESSL LAPACK |
Intel mklAMD amcl |
The Blade Center has multiple copies of the blas and LAPACK
libraries so that these can be run in the Intel, PGI, and gcc
environments. |
| Mr Bayes | | Installed |
http://mrbayes.csit.fsu.edu
|
| NAMD Molecular Dynamics | |
32 bit version 2.6 |
http://www.ks.uiuc.edu/Research/namd/
|
| NCAR Graphics | | Installed |
http://ngwww.ucar.edu/ng4.3/ |
| NCBI Toolbox | | Installed |
Includes BLAST, SEQUIN, FA2HTGS, ENTREZ, and CN3D |
| NWChem | | |
www.emsl.pnl.gov/docs/nwchem/doc/user/index.html |
| Paup | | Installed |
http://paup.csit.fsu.edu/about.html |
PWSCF Espresso | Installed | Installed |
http://www.pwscf.org |
| ScaLAPACK | | Installed |
www.netlib.org/scalapack/ |
| TotalView | | Installed |
http://www.etnus.com/
Another full-featured parallel debugger for the Linux cluster
is the pgdbg debugger for codes compiled with the Portland
Group compilers.
For the POWER5, the pdbx debugger is a parallel debugger |
| Trilinos | | Installed |
http://software.sandia.gov/trilinos/ |
| Vis5D | | Installed 5.1 |
|
| VMD | | Installed 1.8.6 |
http://www.ks.uiuc.edu/Research/vmd/
|
| WRF |   | |
Forecasting Lab Guide to Using WRF |
| Wien2K |   |   |
http://www.wien2k.at/ |
| send email to request other application software for HPC systems |
| | | |
|