The 7th Annual

NC State University

Undergraduate Summer Research Symposium

 

Physics REU program – NCSU


Abstracts are listed in alphabetical order by the last name of the corresponding author.

 

 

 


 

Student Author(s): 

Aggarwal, Parv

Home Institution:

Duke

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Physics

Research Mentor(s)

Dave Aspnes/Physics

Simon Lappi/Chemistry

Title of Presentation:

Reciprocal Space Analysis of FTIR Spectroscopy

 

 

Two fundamental constraints encountered in Fourier Transform Infrared (FTIR) spectroscopy are apodization-related line broadening and resolution limitations, both caused by finite mirror travel. While these constraints are often mitigated by using large mirror travel distances (>1 m), such implementations are often not feasible due to size and cost limitations, such as in the Carbon Cycle Fourier Transform Spectrometer (CC-FTS) satellite monitoring mission. Such cases require the use of numerical methods to compensate, at least partially, instrumental constraints. In this study, we analyze how reciprocal space transformations, used widely in Electro-reflectance Spectroscopy and Spectroscopic Ellipsometry, can be applied to overcome mirror travel constraints in FTIR spectroscopy.

 

 


 

Student Author(s): 

Akerson, Adrian R.

Home Institution:

Embry-Riddle Aeronautical University

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Physics

Research Mentor(s)

Albert Young/Physics

Title of Presentation:

Measurement and Simulation of the Temperature Profile for a Thick Si(Li) Detector System

 


A measurement of the beta-asymmetry in the decay of polarized 19Ne was performed at the Princeton cyclotron using two, segmented, lithium-drifted silicon detectors, or Si(Li)'s.  In this measurement, the timing properties of the detectors were determined using Compton scattering of gamma-rays from 60C decay.  Because the spatial distribution of the ionization produced by the beta-particles emitted following 19Ne decay was quite different from the ionization distribution produced from the 60Co calibration source, there was a residual systematic error in the timing calibration for the beta-asymmetry measurement.  To correct this systematic error, accurate models of the pulse shapes for different ionization distributions must be produced.  This, in turn, requires an accurate spatial temperature profile for the Si(Li) detectors.  Because the original detector was not available, our strategy was to determine an effective temperature range for the detector by attaching silicon diode thermometers to the surface of a silicon disk with similar dimensions to the original Si(Li)'s (0.32 cm thick and 7.32 cm in diameter) in the cold finger and cryogenic mounting arrangement used in the original beta-asymmetry measurement.   The measured thermal profile will then be mapped to the actual Si(Li) detector thermal profiles through temperature distribution models produced using the COSMO code.  Our measurements suggest the original Si(Li) detector had a temperature between 102 and 114 degrees at all points within the detector.  This temperature range is narrow enough to constrain pulse-shape models (now being produced) and the resulting residual systematic error in the timing calibration.

 

 


 

Student Author(s): 

Allen, Cyril A.

Home Institution:

NCSU

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Physics

Research Mentor(s)

John M. Blondin/Physics

Title of Presentation:

Supernova Shear and Magnetic Field Amplification

 

 

A core collapse supernova marks the death of a star over 8 times the size of the sun. Sometimes in the aftermath of these explosions a spinning, magnetized, neutron star can be left behind, also known as a pulsar. It has recently been discovered that pulsar spins can arise through a spiral spherical accretion shock instability (SASI) of a supernova. This instability produces a strong shear flow inside the supernova shock wave, which might lead to amplification of the star's magnetic field.  To study this possibility, hydrodynamic simulations have been modified to include a tracer of the magnetic field by adding the magnetic induction equation to the code. Diagnostics were added to the code to measure the overall field strength and shear flow generated by the SASI.  I found the magnetic field could be amplified by a factor of 100 in only 20 milliseconds. This raises the possibility that shear-induced field amplification might be able to contribute to the energy of the supernova explosion and explain the high magnetic fields of the pulsar left behind.

 

 


 

Student Author(s): 

Brown, Andrew D.

Lynch, I.

Home Institution:

NCSU

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Mechanical Engineering

Physics

Research Mentor(s)

Jacqueline Krim / Physics / Nanotribology

Title of Presentation:

Microtransporting: Tracking the Motion of Microspheres on Quartz Crystal Microbalances

 


In this study 5 µm diameter polystyrene spheres were deposited onto the electrode of a quartz crystal microbalance (QCM).  The QCM was driven at varying drive voltages in orientations normal and parallel to gravity, producing a frequency response that correlates to the crystal amplitude (“decoupling curve”).  The relationship between the frequency response and the crystal amplitude gives rise to the calculation of slip time, which can be used to derive a velocity dependent frictional force between the particles and the surface. A high resolution camera was used to capture the movement of spheres, which showed that the particle motion was dependent on the direction of oscillation of the QCM and gravity in the orientations parallel with gravity.

 

 


 

Student Author(s): 

Canty, Timothy M.

Home Institution:

NCSU

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Physics

Research Mentor(s)

Stephen Reynolds/Physics
Kazimierz Borkowski/Physics

Title of Presentation:

Kepler's Supernova Remnant: An Algorithmic Approach to X-ray Spectral Classification

 

 

In a type Ia supernova, a white dwarf gains mass exceeding a critical limit and explodes. As type Ia supernovae are used as standard luminosity candles for cosmological research,  study of their remnants has wide astrophysical application. Kepler's supernova remnant gives us a unique chance to observe a young (~400 yrs) and nearby type Ia remnant. Although Kepler is clearly a Ia event, our long observation with the Chandra X-ray Observatory shows a few regions that have spectra similar to circumstellar material (CSM), not typical of a standard Ia explosion. In addition to the CSM dominated by oxygen and magnesium lines, there are two other distinct spectral classes:  line-free continuum regions caused by non-thermal bremsstrahlung and synchrotron radiation, and regions with strong iron and silicate lines indicative of hot gas ejected in the explosion. We are adapting an Expectation Maximization Gaussian Mixture Model algorithm commonly used in medical imaging to identify regions of contrasting spectral character. This algorithm effectively removes the subjectivity used in previous visual classifications. It also produces a complete set of similar regions; this improves the signal to noise ratio of the resulting spectra which allows for better statistical data. We are attempting to separate non-thermal emission from thermal emission and also identify areas of CSM. By automating this process, we show the algorithm can correctly identify important regions and aim to use this approach to gain insight on why Kepler's supernova differs from other Ia events.

 

 


 

Student Author(s): 

Fisher, Alexander A.

Home Institution:

St. Lawrence

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Physics

Research Mentor(s)

Hans Hallen/Physics

Title of Presentation:

Voltage-Assisted Photoemission Using Ultraviolet Near-Field Scanning Optical Microscopy

 

 

Near-field scanning optical microscopy (NSOM) can be used to provide us with high resolution images of photoelectron production as well as optical and electrical data. We used a tunable ultraviolet to create photoelectrons which we then collected with the metal coating on the NSOM tapered optical fiber tip. The close proximity of the tip and sample allowed us to create an extremely high electric field with only modest (few volt) bias between the tip and sample. These high fields can change the local work function of the material and thus aid the removal of the electrons. This NSOM configuration permits variations of laser wavelength, tip-sample distance, collection voltage, and lateral position on a sample, enabling robust model testing of voltage-assisted photoemission.

 


 

Student Author(s): 

Fox, Christopher J.

Home Institution:

Harvey Mudd College

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Physics

Research Mentor(s)

Karen E. Daniels/Physics

Title of Presentation:

Determining the Rate of Capillary Ridge Spreading via Laser Line Profiling

 

 

Surfactant applied to a thin fluid film is known to reduce the surface tension and form a capillary ridge centered on the point of insertion.  Understanding the mechanics of this phenomenon in detail requires the ability to track the concentration of the surfactant across the fluid surface while simultaneously measuring the rate of change of the fluid’s height profile.  The purpose of this REU research was to measure the rate of spreading of the capillary ridge using laser imaging techniques.  By carefully extracting the displacement of a thin laser line from a time series of photographs and calibrating, we have developed a precise and non-invasive means to resolve the height profile of a thin fluid layer along a desired axis.  Measured at regular time intervals, these height profiles allow us to determine the velocity of the capillary ridge during spreading.

 

 


 

Student Author(s): 

Gibson, Clint M.

Home Institution:

NCSU

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Physics

Research Mentor(s)

John M. Blondin/Physics

Title of Presentation:

Formation of the Ring of Pearls Around SN 1987A

 

 

Observations of Supernova (SN) 1987A indicate the existence of a deformity in the ring of shocked gas surrounding the supernova.  We have investigated the possibility that a non-linear thin shell instability (NTSI) is accountable for this deformity.  The NTSI occurs under certain conditions, in shells comprised of shocked medium, where the fluctuation parallel to the flow direction is greater in size than the thickness of the shell itself.  This instability could produce fingers protruding inward of the shell.  As the blast wave propagates outward from the core, it would hit these fingers first.  This would produce intermittent spurts of light around center of the SN, as is the effect observed in the case of SN 1987A. This study uses a three dimensional hydrodynamics code to model the circumstellar shell formed by the progenitor star of SN 1987A.  The values known from observations of SN 1987A are used in the production, keeping the model as accurate as possible.  We first show that spherical shells are susceptible to the NTSI, provided that the Mach number of both shocks is > 5.  We then use the original model of Martin and Arnett to explain the circumstellar shells of 1987A.  We find that when we apply their model to 3-D, the inner rig is deformed by the NTSI.

 

 

 


 

Student Author(s): 

Lamar, Tyra A.

Home Institution:

North Carolina Central University

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Physics

Research Mentor(s)

Robert Riehn/Physics

Title of Presentation:

Assembling Synthetic Genes with Custom Epigenetic Modifications

 

 

The recent study of epigenetics, inheritable alterations in gene expression that do not change DNA sequences, has given researchers greater insight into the growth of several types of cancer. As a result of this developing field, scientists have discovered that cancer cells are caused by chemical changes in gene behavior, as opposed to mutations in the genes themselves. One frequently studied epigenetic mechanism used by cancer is DNA methylation, which is the addition of a methyl group to a DNA strand to partially suppress gene function. The goal of this research is to methylate synthetically assembled genes and to study the methylation’s physical effects on the DNA strands. These genes of known length and known sequence can consequently serve as a standard for future methylated DNA studies.  I constructed the synthetic genes using Polymerase Chain Reaction (PCR), a method of replicating single-stranded DNA primers to form double-stranded DNA. To measure the length of my PCR genes, I ran the PCR solution through gel electrophoresis.  I then amplified this nucleotide solution using a second PCR reaction to increase the DNA concentration, measuring this DNA length as well. This higher concentration DNA solution was methylated using BST-1 antibodies. Once the methylation has been optimized, I aim to bind antibodies to the DNA in an effort to visualize the methylation sites. Finally, I will analyze the methylated DNA using gel electrophoresis in hopes of detecting the methylated areas of the genes and studying their properties.

 

 


 

Student Author(s): 

Learner, Christopher M.

Zhang, Y.

Sandin, A.

Wu, D.

Home Institution:

NCSU

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Physics

Research Mentor(s)

Jack E. Rowe/Physics

Title of Presentation:

Low Energy Electron Diffraction and Atomic Force Microscopy of Epitaxial Zinc Oxide Films

 

 

Single Crystal Zinc Oxide films have many interesting technological applications. They can be used to make p-n junctions which are used in LED’s and transistors. Zinc Oxide is a TCO or Transparent Conducting Oxide. This property allows for applications in LCD screens, thin-film solar cells, and flat-panel displays. The purpose of the current thin-film Zinc Oxide research is to develop ways of growing very uniform heteroepitaxial thin films of ZnO. The goal is to eventually be able to consistently produce perfectly smooth single crystal films. We use Low Energy Electron Diffraction (LEED) to investigate the periodicity of the ZnO samples produced. LEED works by shooting an approximately 1mm diameter beam of electrons at the sample under UHV conditions and projecting the diffracted electrons onto a phosphor screen. The phosphor emits visible light when the scattered electrons hit it. The pattern that appears on the screen is then a representation of the inverse lattice of the material. The ZnO LEED displays a hexagonal inverse lattice which gives a real-space lattice constant of 2.21 Angstroms. We also use Atomic Force Microscopy (AFM) to measure the topography of the samples, from which we can gather information about the domain size of the ZnO crystals. These domains appear to range in length from approximately 300-700nm, width from 180-270nm, and height from 20-50 nm. Optical microscopy has been used to gain a qualitative understanding of the differences in surface features and domain sizes on different areas of the surface. Analysis of the data has shown that the diffraction patterns are from single crystal orientation epitaxial films. We have also found that there are sample charging effects that occur during LEED measurements. The sample charging effects vary according to electron energy and range from 26 to 43 Volts.

 


 

Student Author(s): 

Lease, Christopher A.

Home Institution:

State University of New York at New Paltz

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Physics

Research Mentor(s)

Jack E.Rowe/Physics

Title of Presentation:

Spherical Microwave Confinement of Plasma for Fusion Reactions

 

 

Spherical Microwave Confinement uses electrostatics and microwaves to confine a plasma.  Previous attempts at this provided insight for modifications that could be made in order for this to occur.  The plasma, in this situation, is a low density, low temperature plasma that is slightly ionized in air.  Under fusion conditions it will become fully ionized.  The ultimate goal will be to use deuterium as a fuel, instead of air, with the modified antennas.  The helical antennas used in the trial need to be modified from their initial version. A first trial uses Polyclay to fill the center of the antennas.  The surfaces of them have a silicon sealant.  Aluminum foil is wrapped around the base of the antennas to prevent any undesirable plasma formation at the base. The next antenna design uses copper conical coils molded in vinyl ester resin and coated with ceramic.  We added an improved grid and coated the inner surface of the sphere with ceramic to prevent a current between the grid and the sphere.  To obtain optimal results in fusion experiments the pressure inside of the sphere needs to be as low as possible before backfill to 1 to 10 mTorr.  We installed a turbo molecular pump and replaced most of the plumbing that was plastic with metal and will use this in future trials.

 

 


 

Student Author(s): 

Martin, Kyle J.

Home Institution:

NCSU

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Physics

Research Mentor(s)

Stephen P. Reynolds/Physics

Title of Presentation:

X-ray Emission from Iron in Kepler’s Supernova Remnant

 

 

Supernova remnants (SNRs) are the bright and gaseous remains of exploded stars that are expanding at several thousand kilometers per second. One of the more prominently studied of these objects is the remnant of Kepler’s supernova of 1604 AD. Kepler’s SNR has similar features to a Type Ia event, which is characterized by an exploding white dwarf and a lack of hydrogen in the spectra. In addition, Kepler’s SNR has a very strong iron presence in the spectra. This is important because the location, velocity, and physical conditions of the iron give information on the explosion mechanism and progenitor system, and can be studied through a spectral feature in the x-ray region of the spectrum, the K alpha line. This analysis focuses on characteristics of the iron K emission line between 5.7 and 7 keV. In early 2006, the Chandra X-ray Observatory spent 741 thousand seconds observing this object and recording data with its ACIS-S CCD camera. In analyzing the data, the spectra were plotted and fitted with the Gaussian and thermal Bremsstrahlung models. These models allowed for the measurement of characteristics such as the line energy, line width, and temperature of the selected region in the SNR. From this information, other information such as the velocities of the ejected matter (from Doppler shifts), and ionization states of the iron can be determined. The result of this research will yield a better understanding of the SNR phenomenon.

 

 


 

Student Author(s): 

Pfeiffer, Erik W.

Home Institution:

Rowan University

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Physics

Research Mentor(s)

Jack E. Rowe/Physics

Title of Presentation:

Clustering and Coalescence of Nanoscale Islands on CoSi2 and TiSi2 Surfaces

 

 

Transition metal silicide (CoSi2, TiSi2) islands can be formed by deposition on a silicon wafer.  At high annealing temperatures (>1000°C) these islands will undergo the late-stage effects of Ostwald Ripening and coalescence.  Measurable values such as the density, size, and height of the islands, combined with known values such as annealing temperature and annealing time, will reveal necessary insight into separate projects involving nano-scale bridges and other technology.  The samples themselves were made previously by graduate students in the Surface Science Lab at NCSU.  Measurements were taken using an auto-probe Atomic Force Microscope, which is accurate down to the Angstrom scale.  AFMs measure topography and error signal by monitoring frequency oscillations between the probe-tip and the sample.  A photo-detector also measures angular changes in a laser which is reflected off of the tip, effectively detecting minute changes in the z-direction.  Image analysis is done using AutoProbe-Image software.  This poster will reveal how annealing temperature directly affects the density of islands, whether a preferred island size exists for any annealing temperature, and whether the shape of the islands differs in regards to the crystal structure of the film.  Preliminary data suggests a mode of two CoSi2 islands per 5x5 micrometer area in ~1200º C annealing areas, while in ~1150º C areas, the amount of islands increases substantially to an average of 28 islands.  The density of the region can suggest whether material was lost or gained during coalescence.  Islands in the former region have an average width of one micrometer, and a height of 85 nanometers, while the latter tends to support islands of only 300 nanometers in width and approximately twelve nanometers in height.  Other trends such as island dominance (islands which significantly vacate their surrounding region), tendency towards preferred size, height, and ellipticity will be discussed.

 


 

Student Author(s): 

Pope, Thomas C.

Home Institution:

NCSU

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Physics

Research Mentor(s)

John M. Blondin/Physics

Title of Presentation:

Bondi-Hoyle-Lyttleton Accretion: Questions for Flip-flopping

 

 

The night sky is full of point sources of X-rays, most of which are black holes or neutron stars gaining matter. The fundamental mechanism behind this accretion was first theorized by Bondi and Hoyle in 1939. The two considered the scenario in which a compact object travels through a cloud of interstellar medium in order to understand how it would gain material. Once it was theorized that accretion may lead to gaining angular momentum Fryxell and Taam began using hydrodynamic simulations to show that if a density gradient is introduced perpendicular to the incident flow, the shock behind the compact object will 'flip-flop' and even flip over the object, resulting in the formation of an accretion disk. The disk spins one direction, disappears, and is later formed again, spinning in the counter direction. Several authors since have noticed errors inherent in the simulations from which this result was found. These include poor numerical resolution, inappropriate boundary conditions upstream, and an unrealistically large accretor. My research seeks to find more accurate results using a more complete computer code which will account for the aforementioned errors. I've found that the  'flip-flop' instability occurs when the adiabatic index of the gas is 4/3 but these oscillations dampen out completely when the adiabatic index is set to 5/3. Also, the instability only appears so long as the density asymmetry parameter is small. A critical point seems to exist between .005 and .0625 beyond which the instability no longer occurs.

 

 


 

Student Author(s): 

Will, David A.

Home Institution:

Heidelberg College

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Astrophysics

Research Mentor(s)

John Blondin/Astrophysics

Title of Presentation:

Bridging the Gap Between Binary Systems and Thermonuclear Supernovae

 

 

Thermonuclear supernovae (known as Type Ia supernovae) are thought to stem from binary star systems.  This project intends to build upon current knowledge of binary systems through 3D analysis of a red giant-white dwarf binary system (RG+WD). Of particular interest will be the interaction of the stellar winds between the two stars (often referred to as a colliding wind phenomenon). Here, we consider a red giant at the origin of a spherical coordinate system and a white dwarf in orbit around it.  Using a hydrodynamic code evolving the fluid equations over time, a working 3D model can be produced that will provide insight into the cause of such supernovae.

 

 


 

Student Author(s): 

Woody, Michael S.

Home Institution:

University of North Carolina, Chapel Hill

Program:

Physics REU program – NCSU

College:

PAMS

Department(s):

Physics

Research Mentor(s)

Thomas P. Pearl/Physics

Pengshun Luo/Physics

Title of Presentation:

Observation, Characterization, and Modeling of Molecular Rings Formed from DNA Deposited on Au(111)

 

A method of measuring the sequence dependent properties of surface bound single and double stranded DNA may be possible using scanning probe microscopy, providing researchers an additional method for obtaining and verifying sequencing data.  DNA deposited on a Au(111) surface of various strand lengths, sequences, and surface anchoring chemistry has been successfully imaged using scanning tunneling microscopy (STM) and atomic force microscopy (AFM).  For one particular short, 45 base pair long DNA segment chemically anchored on the gold surface, with a specific sequence containing a 15 bp AT spacer, ring-like structures have been observed.  Understanding the composition and formation mechanisms of these structures may lead to an improved ability to image DNA with STM on Au(111) as well as a better method for preparing individually isolated DNA molecules on surfaces.  During the course of the experiment, parameters such as DNA concentration, exposure time, and buffer solution were varied.  Concentration and exposure time appeared to have some impact on the rings’ appearance and the number of rings observed.  In an attempt to gain more insight into the structures, a computer model was constructed based on electrostatic interaction between the DNA molecules.  This model should provide additional information about the composition and formation mechanisms of the ring structures.


 

 

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